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This page attempts to collect all the Python packages associated with medicine, pre-clinical research, life science and bioinformatics for the community. Its modelled along the [[http://wiki.debian.org/DebianMed | Debian Med project]] 
This page attempts to collect all the Python packages associated with medicine, pre-clinical research, life science and bioinformatics for the community. Its modelled along the [[http://wiki.debian.org/DebianMed|Debian Med project]]
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Biopython facilitates the use of Python for bioinformatics through high-quality, reusable modules and classes. Biopython features include parsers for various Bioinformatics file formats (BLAST, Clustalw, FASTA, Genbank,...), access to online services (NCBI, Expasy,...), interfaces to common and not-so-common programs (Clustalw, DSSP, MSMS...), a standard sequence class, various clustering modules, a KD tree data structure, etc.
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 * [[http://biopython.org/wiki/Biopython | Biopython wiki]]  * compatible with Python 2 and 3
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 * Debian packages: [[http://packages.debian.org/unstable/python/python-biopython-sql | unstable release]]  * requires: [[NumPy|NumPy]]
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 * Ubuntu packages: [[http://packages.ubuntu.com/jaunty/python/python-biopython-sql | jaunty]]  * [[http://biopython.org/wiki/Biopython|Biopython wiki]] [[https://pypi.python.org/pypi/biopython|Biopython at PyPI]]

 * Linux packages: [[https://packages.debian.org/search?searchon=sourcenames&keywords=python-biopython|python-biopython Debian packages]] [[http://packages.ubuntu.com/search?suite=default&section=all&arch=any&keywords=biopython&searchon=sourcenames|python-biopython Ubuntu packages]] [[https://apps.fedoraproject.org/packages/python-biopython|python-biopython Fedora package]] [[https://www.archlinux.org/packages/?q=biopython|python-biopython Archlinux packages]]

PythonMed

This page attempts to collect all the Python packages associated with medicine, pre-clinical research, life science and bioinformatics for the community. Its modelled along the Debian Med project

Biopython

Biopython facilitates the use of Python for bioinformatics through high-quality, reusable modules and classes. Biopython features include parsers for various Bioinformatics file formats (BLAST, Clustalw, FASTA, Genbank,...), access to online services (NCBI, Expasy,...), interfaces to common and not-so-common programs (Clustalw, DSSP, MSMS...), a standard sequence class, various clustering modules, a KD tree data structure, etc.


CategoryPythonInScience

PythonMed (last edited 2019-12-02 00:32:22 by FrancesHocutt)

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